![]() Both the MDFF GUI and command line plugins now use CHARMM36 as the default parameter set. The cispeptide, chirality, and the new TorsionPlot, and QwikMD plugins now connect to the MDFF GUI to simplify finding and fixing errors or setting up your structure for MDFF. The MDFF graphical user interface (GUI) in the Modeling section of the VMD Extensions menu has been updated to reflect the use of multiple maps in addition to many other usability improvements. The MDFF setup plugin now supports the use of multiple density maps in a single MDFF simulation.
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